Jolecule
the protein viewer in the cloud

No install

Web-based HTML5 - iOS friendly

Practical

Focuses on residues in a structure

Permanent

Every structure has it's own URL

Embedding

Click embed to put jolecule on any page

Store

Login and upload your structures

Animate

Easy set-up for animated slide-shows


Enter PDB-ID or search with key-words:

Annotated Structures

1MBO
Myoglobin, the oxygen grabber

1YFG
Transfer RNA, the adaptor for RNA and proteins

1TAU
Polymerase, copying DNA

1RVC
Endonuclease, cutting DNA

1CE1
Antibody, the foreign particle detector

9RUB
Rubisco, the carbon fixer

3FYL
Glucocortocoid Receptor, binding to DNA

1A31
Topoisomerase, untwists DNA

1MXK
Bleomycin, cancer therapy drug, cuts DNA

1ZAA
Zinc-finger, binds DNA

1K90
Serpin-Protease complex

Local Version for Your Desktop

http://github.com/boscoh/jolecule

Zoom

Right-Mouse, or Shift-Left-Mouse, or Pinch-Zoom


Distance Labels

Drag from central atom


Atom Labels

Double click on central atom

Keyboard Shortcuts

A - add atom label

S - show all sidechains
C - hide all sidechains
N - show neighbour sidechains around central atom

B - cycle through backbone representations
H - hide/show hydrogens
W - hide/show waters
L - hide/show ligands

[numbers] - choose view
J/K - center to prev/next residue
[up]/[down] - select prev/next view
' ' - next view


Widget Controls

j - got to full page version
lig - hide/show ligands
h - hide/show hydrogen atoms
wat - hide/show water molecules

bb - cycle through backbone styles

sc - show all sidechains
clr - hide all sidechains
neig - show neighbouring sidechains of central residue

loop - start/stop slideshow
create - make new view
text - show/hide view text

Designed by Bosco Ho